snakemake-CodePudding

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09-05front endSnakemake Salsa2 CreateCondaEnvironmentException with python 2.7. and openssl
08-24MobileReserved name in Snakemake?
08-24Back-endWhat is the format for a Snakemake JSON config file?
08-19BlockchainCan I run a try-except block (or similar) inside a Snakemake rule?
08-19Software designSnakemake "Function did not return str or list of str."
08-13databaseAvoid shell printing output when running in params directive
08-10Software designPerl installed via conda snakemake shell error: Can´t open perl script .. no such file or directory
08-06BlockchainWrong snakemake glob_wilcards and wildcard_constraints
06-29databaseSnakemake bash strict mode how to fix "_([^_] )_"?
06-22OSHandling multiple inputs for command in Snakemake
06-13Software engineeringApply snakemake rule on all generated files
05-24EnterpriseSnakemake trouble accessing nested values in config.yaml
05-20Software designHow to run an AWK script within the input section of snakemake (in order to retrieve a snakemake inp
05-05MobileMV command isnt moving files in Snakemake Rule
05-02Software engineeringNon traditionally Snakemake output for next rules input
04-05front endSnakemake: Manually creating a wildcard from a string
03-30Software engineeringGetting command line flags from snakemake
02-28EnterprisePreinstall conda envs Snakemake
02-23databaseHow to use a wildcard within expand function parameters in snakemake?
02-18databaseHow to use pandas within snakemake pipelines
02-17MobileArray of values as input in Snakemake workflows
02-14OSCan a snakemake rule depend on data in the file instead of its change state
02-11Back-endSnakemake Local-Only
12-31databaseSnakemake: create multiple wildcards for the same argument
10-07front endsnakemake module from github changes targets?
10-02Software engineeringHow to give explicitly input and output to Snakemake file?
09-23Software designHow to get the names of the files using glob function in python?