Dependency limma not available when installing MKmisc package-CodePudding

When installing this package in R 4.2.1

install.packages("MKmisc")

I have this output

Installing package into ‘C:/Users/blahblah/AppData/Local/R/win-library/4.2’
(as ‘lib’ is unspecified)
Warning in install.packages :
  dependency ‘limma’ is not available
trying URL 'https://cran.rstudio.com/bin/windows/contrib/4.2/MKmisc_1.8.zip'
Content type 'application/zip' length 769544 bytes (751 KB)
downloaded 751 KB

package ‘MKmisc’ successfully unpacked and MD5 sums checked

It does not work as we need to download the package limma so let's do it

install_github("cran/limma")

However it gives an error and the MKmisc package is still not working

What should I do to handle this problem?

CodePudding user response：

"limma" can be installed using BiocManager.

if (!require("BiocManager", quietly = TRUE))
  install.packages("BiocManager")

BiocManager::install("limma")
install.packages("MKmisc")
# * DONE (MKmisc)
# The downloaded source packages are in
#         ‘/tmp/Rtmphwh6rY/downloaded_packages’