I have implemented a recurrent neural network autoencoder as below:
def AE_GRU(X):
inputs = Input(shape=(X.shape[1], X.shape[2]), name="input")
L1 = GRU(8, activation="relu", return_sequences=True, kernel_regularizer=regularizers.l2(0.00), name="E1")(inputs)
L2 = GRU(4, activation="relu", return_sequences=False, name="E2")(L1)
L3 = RepeatVector(X.shape[1], name="RepeatVector")(L2)
L4 = GRU(4, activation="relu", return_sequences=True, name="D1")(L3)
L5 = GRU(8, activation="relu", return_sequences=True, name="D2")(L4)
output = TimeDistributed(Dense(X.shape[2]), name="output")(L5)
model = Model(inputs=inputs, outputs=[output])
return model
and after that I am running the below code to train the AE:
model = AE_GRU(trainX)
optimizer = tf.keras.optimizers.Adam(learning_rate=0.01)
model.compile(optimizer=optimizer, loss="mse")
model.summary()
epochs = 5
batch_size = 64
history = model.fit(
trainX, trainX,
epochs=epochs, batch_size=batch_size,
validation_data=(valX, valX)
).history
I have also attached the result of model.summary()
below.
At the end I am extracting the second hidden layer outputs by running the below code.
def all_hidden_layers_output(iModel, dtset):
inp = iModel.input # input placeholder
outputs = [layer.output for layer in iModel.layers] # all layer outputs
functors = [K.function([inp], [out]) for out in outputs] # evaluation functions
layer_outs = [func([dtset]) for func in functors]
return layer_outs
hidden_state_train = all_hidden_layers_output(model, trainX)[2][0]
hidden_state_val = all_hidden_layers_output(model, valX)[2][0]
# remove zeros_columns:
hidden_state_train = hidden_state_train[:,~np.all(hidden_state_train==0.0, axis=0)]
hidden_state_val = hidden_state_val[:,~np.all(hidden_state_val==0.0, axis=0)]
print(f"hidden_state_train.shape={hidden_state_train.shape}")
print(f"hidden_state_val.shape={hidden_state_val.shape}")
But I don't know why some of the units in this layer return zero all the time. I expect to get hidden_state_train
and hidden_state_val
as 2D numpy array with 4 non-zeros columns (based on the model.summary()
information). Any help would be greatly appreciated.
CodePudding user response:
This may be because of the dying relu problem. The relu is 0 for negative values. Have a look at this (https://towardsdatascience.com/the-dying-relu-problem-clearly-explained-42d0c54e0d24) explanation of the problem.