I've update my Airbyte image from 0.35.2-alpha
to 0.35.37-alpha
.
[running in kubernetes]
When the system rolled out the db pod wouldn't terminate and I [a terrible mistake] deleted the pod. When it came back up, I get an error -
PostgreSQL Database directory appears to contain a database; Skipping initialization
2022-02-24 20:19:44.065 UTC [1] LOG: starting PostgreSQL 13.6 on x86_64-pc-linux-musl, compiled by gcc (Alpine 10.3.1_git20211027) 10.3.1 20211027, 64-bit
2022-02-24 20:19:44.065 UTC [1] LOG: listening on IPv4 address "0.0.0.0", port 5432
2022-02-24 20:19:44.065 UTC [1] LOG: listening on IPv6 address "::", port 5432
2022-02-24 20:19:44.071 UTC [1] LOG: listening on Unix socket "/var/run/postgresql/.s.PGSQL.5432"
2022-02-24 20:19:44.079 UTC [21] LOG: database system was shut down at 2022-02-24 20:12:55 UTC
2022-02-24 20:19:44.079 UTC [21] LOG: invalid resource manager ID in primary checkpoint record
2022-02-24 20:19:44.079 UTC [21] PANIC: could not locate a valid checkpoint record
2022-02-24 20:19:44.530 UTC [1] LOG: startup process (PID 21) was terminated by signal 6: Aborted
2022-02-24 20:19:44.530 UTC [1] LOG: aborting startup due to startup process failure
2022-02-24 20:19:44.566 UTC [1] LOG: database system is shut down
Pretty sure the WAL file is corrupted, but I'm not sure how to fix this.
CodePudding user response:
Warning - there is a potential for data loss
This is a test system, so I wasn't concerned with keeping the latest transactions, and had no backup.
First I overrode the container command to keep the container running but not try to start postgres.
...
spec:
containers:
- name: airbyte-db-container
image: airbyte/db
command: ["sh"]
args: ["-c", "while true; do echo $(date -u) >> /tmp/run.log; sleep 5; done"]
...
And spawned a shell on the pod -
kubectl exec -it -n airbyte airbyte-db-xxxx -- sh
Run pg_reset_wal
# dry-run first
pg_resetwal --dry-run /var/lib/postgresql/data/pgdata
Success!
pg_resetwal /var/lib/postgresql/data/pgdata
Write-ahead log reset
Then removed the temp command in the container, and postgres started up correctly!