I'm creating three plots in a loop over I
and using assign
to save each plot. The y variable is scaled by the loop index. The scaling should ensure that the final panel of plots each has y going from 0 to 1. This isn't happening and the plots seem to be being changed as the loop runs. I'd be grateful if someone could explain this apparently odd behaviour.
library(dplyr)
library(ggplot2)
library(gridExtra)
loci = c(1,2,3)
x <- seq(0,1,0.01)
df <- expand.grid(x = x, loci = loci)
df <- df %>% mutate(y = loci * x)
cols = c("red", "blue", "green")
for (i in loci){
plot_this <- df %>% filter(loci == i)
my_plot = ggplot(plot_this)
geom_point( aes( x = x, y = y/i), colour = cols[i])
ylim(0,3) ggtitle(paste0("i = ", i))
assign(paste0("plot_", i), my_plot)
print(plot_1)
}
grid.arrange(plot_1, plot_2, plot_3, ncol = 3)
CodePudding user response:
It's due to the lazy evaluation nature of ggplot
, and more explanation can be found in this post.
"Looping" with lapply
avoids the problem.
Data
library(ggplot2)
library(gridExtra)
library(dplyr)
loci = c(1,2,3)
x <- seq(0,1,0.01)
df <- expand.grid(x = x, loci = loci)
df <- df %>% mutate(y = loci * x)
cols = c("red", "blue", "green")
Code
my_plot <- lapply(loci, function(i) {
df %>%
filter(loci == i) %>%
ggplot()
geom_point(aes(x = x, y = y/i), colour = cols[i])
ylim(0,3)
ggtitle(paste0("i = ", i))
})
grid.arrange(my_plot[[1]], my_plot[[2]], my_plot[[3]], ncol = 3)
Created on 2022-04-26 by the reprex package (v2.0.1)