As title states, I'm trying to plot a time course of a response variable (that has 2 factors), working environment based in Rstudio. I'm working off a data frame that's already in long format. Something like:
|Week| Factor1 | Factor2| Response|
1 Sunny High 2.0
1 Sunny High 3.5
1 Rainy Low 2.5
1 Rainy Low 1.5
2 Sunny High 42.5
2 Sunny High 435
2 Rainy Low 44.5
2 Rainy Low 42.5
3 Sunny High 80.5
3 Sunny High 89.5
3 Rainy Low 88.5
3 Rainy Low 87.5
I would like to do a time course with this data frame, but haven't had much success as I cannot figure out how to make ggplot2 plot the Response line as a variable responding to the combination of Factors.
I've sort of done it with geom_smooth(se=FALSE) instead of geom_line. Doing so with the se=FALSE argument removes the confidence interval bounds.
library(dplyr)
library(ggplot2)
library(tidyr)
df %>%
unite(Factor, c(Factor1, Factor2)) %>%
ggplot(aes(Week, Response, group = Factor, color = Factor))
geom_smooth(se=FALSE)
or
df <- unite(df,col='Combined Factors',c(Factor1,Factor2),sep='-',remove=FALSE)
df %>%
group_by(Week,`Combined Factors`) %>%
mutate(avg_Response=mean(Response),se_Response=sd(Response)/sqrt(4)) %>%
ggplot(aes(Week, Response,group=`Combined Factors`,color=`Combined Factors`))
geom_smooth(se=FALSE) %>%
{.} -> Line_plot_Response