I have a list of models. The modelsummary documentation mentions being able to save to Excel format (https://cran.r-project.org/web/packages/modelsummary/modelsummary.pdf). I can't get it to work. If Excel isn't possible, is there another 'spreadsheet'-type format? I like to be able to compactly annotate my output within different rows and columns and make notes. Docx output is way too clunky for that. I realize I can output as .html and then open and save it as Excel ... but that's a lot of clicking ... I'm running a lot of models.
An example:
library(modelsummary)
models = list(
"mpg" = lm(mpg ~ vs, data = mtcars),
"am" = glm(am ~ vs, family = binomial, data = mtcars),
"wt" = lm(wt ~ vs, data = mtcars)
)
modelsummary(models, stars = TRUE, output = "models.xlsx")
An error is then thrown:
Error in sanitize_output(output) : The
output
argument must be default, gt, kableExtra, flextable, huxtable, html, jupyter, latex, latex_tabular, markdown, dataframe, data.frame, modelsummary_list, or a valid file path with one of these extensions: html, tex, md, txt, docx, pptx, rtf, jpg, png
CodePudding user response:
You can output to data.frame
and then write the file to CSV (using write.csv
) or XLSX files (using the openxls
package). Excel will be able to open files in either format:
library(modelsummary)
library(openxlsx)
models = list(
"mpg" = lm(mpg ~ vs, data = mtcars),
"am" = glm(am ~ vs, family = binomial, data = mtcars),
"wt" = lm(wt ~ vs, data = mtcars))
tab <- modelsummary(models, stars = TRUE, output = "data.frame")
write.csv(tab, "models.csv")
write.xlsx(tab, "models.xlsx")
I opened an issue on Github with a feature request to make it easier to save directly to Excel using the output
argument. You can follow progress here: https://github.com/vincentarelbundock/modelsummary/issues/554