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Large Datsample: failing to better visualize data point using matplotlib plot

Time:01-06

The size of the data samples is very large, making it difficult to visualise the data points using a matplotlib plot.

Sample Code:

import matplotlib.pyplot as plt

plt.plot(myList_timestamps, myList_fitnessValues)
plt.xlabel('Timestamps (seconds)')
#plt.xticks(range(1, 51)
#plt.xticks(range(1, 53, 5))
plt.ylabel('WATT - MSU Fitness Values')
plt.title('Evolutionary Optimization - Execution Time')
plt.show()

Output:

enter image description here

I have 9113 candidates solutions as data samples to plot against 9113 data samples as fitness values. How should I plot this large data using python to better visualize the data?

Data Sample:

myList_timestamps = [[0.06160092353820801,
 0.07070684432983398,
 0.0794517993927002,
 0.08730483055114746,
 0.09506797790527344,
 0.10278487205505371,
 0.11050796508789062,
 0.11819696426391602,
 0.12598776817321777,
 0.13364410400390625,
 0.1412339210510254,
 0.14882898330688477,
 0.15642499923706055,
 0.16405892372131348,
 0.171644926071167,
 0.17924880981445312,
 0.1868269443511963,
 0.1943988800048828,
 0.2020108699798584,
 0.21060776710510254,
 0.219498872756958,
 0.22813701629638672,
 0.23638296127319336,
 0.24529194831848145,
 0.25347185134887695,
 0.26166296005249023,
 0.2696189880371094,
 0.2773740291595459,
 0.2849307060241699,
 0.2925240993499756,
 0.30014586448669434,
 0.3077728748321533,
 0.31533288955688477,
 0.32283592224121094,
 0.3303370475769043,
 0.3378570079803467,
 0.34534668922424316,
 0.352841854095459,
 0.36031174659729004,
 0.3678579330444336,
 0.3753628730773926,
 0.3828439712524414,
 0.3903648853302002,
 0.39795589447021484,
 0.40547990798950195,
 0.412992000579834,
 0.42046594619750977,
 0.42803382873535156,
 0.435579776763916,
 0.44308996200561523,
 0.450577974319458,
 0.45802807807922363,
 0.4655318260192871,
 0.4730229377746582,
 0.48052191734313965,
 0.488048791885376,
 0.49558186531066895,
 0.5031087398529053,
 0.5106048583984375,
 0.5181560516357422,
 0.525662899017334,
 0.5331556797027588,
 0.5406389236450195,
 0.5481007099151611,
 0.5555720329284668,
 0.563060998916626,
 0.5705769062042236,
 0.578115701675415,
 0.5856177806854248,
 0.5931298732757568,
 0.6006178855895996,
 0.6081528663635254,
 0.6156718730926514,
 0.6231448650360107,
 0.6306188106536865,
 0.6381428241729736,
 0.6456358432769775,
 0.6531088352203369,
 0.6606647968292236,
 0.6682088375091553,
 0.6756858825683594,
 0.6832168102264404,
 0.6907000541687012,
 0.6981749534606934,
 0.7056229114532471,
 0.7130780220031738,
 0.7205479145050049,
 0.728065013885498,
 0.7355530261993408,
 0.743027925491333,
 0.7505538463592529,
 0.7580459117889404,
 0.7654819488525391,
 0.7729947566986084,
 0.7804989814758301,
 0.7879579067230225,
 0.7954659461975098,
 0.8029458522796631,
 0.8104219436645508,
 0.8179588317871094,
 0.8254818916320801,
 0.8329558372497559,
 0.840451717376709,
 0.8479418754577637,
 0.8554189205169678,
 0.8629167079925537,
 0.8704218864440918,
 0.8782069683074951,
 0.8857617378234863,
 0.8933010101318359,
 0.9008169174194336,
 0.9083929061889648,
 0.9159009456634521,
 0.923414945602417,
 0.9309487342834473,
 0.9386038780212402,
 0.9461567401885986,
 0.9536347389221191,
 0.9610898494720459,
 0.9685368537902832,
 0.9759769439697266,
 0.983414888381958,
 0.9908480644226074,
 0.9982888698577881,
 1.0057227611541748,
 1.01314377784729,
 1.0205698013305664,
 1.0280189514160156,
 1.035449743270874,
 1.0429389476776123,
 1.0503628253936768,
 1.0578010082244873,
 1.0658130645751953,
 1.0734107494354248,
 1.081054925918579,
 1.0888869762420654,
 1.0964579582214355,
 1.1040010452270508,
 1.1115117073059082,
 1.1190118789672852,
 1.1264939308166504,
 1.1339750289916992,
 1.141474723815918,
 1.1489946842193604,
 1.156526803970337,
 1.164029836654663,
 1.1716160774230957,
 1.1790966987609863,
 1.1865930557250977,
 1.1940937042236328,
 1.2019388675689697,
 1.2094628810882568,
 1.216930866241455,
 1.2243878841400146,
 1.2318336963653564,
 1.2393128871917725,
 1.2467608451843262,
 1.2542097568511963,
 1.2619950771331787,
 1.2704198360443115,
 1.2786128520965576,
 1.2871167659759521,
 1.2947309017181396,
 1.302293062210083,
 1.309783697128296,
 1.3177897930145264,
 1.3256456851959229,
 1.3331577777862549,
 1.340836763381958,
 1.348417043685913,
 1.355942964553833,
 1.3635058403015137,
 1.3709850311279297,
 1.3785638809204102,
 1.3860559463500977,
 1.3935277462005615,
 1.4009969234466553,
 1.408479928970337,
 1.415954828262329,
 1.423440933227539,
 1.4309158325195312,
 1.4383947849273682,
 1.4458889961242676,
 1.453355073928833,
 1.4608356952667236,
 1.468317985534668,
 1.4757959842681885,
 1.4833028316497803,
 1.4908149242401123,
 1.4983007907867432,
 1.505788803100586,
 1.5132827758789062,
 1.520780086517334,
 1.5282917022705078,
 1.5357389450073242,
 1.5432488918304443,
 1.5507168769836426,
 1.5581979751586914,
 1.565687656402588,
 1.5731756687164307,
 1.58066987991333,
 1.5881669521331787,
 1.5956358909606934,
 1.6031649112701416,
 1.6106679439544678,
 1.6181929111480713,
 1.6265389919281006,
 1.634814977645874,
 1.6424179077148438,
 1.6499037742614746,
 1.657348871231079,
 1.6648588180541992,
 1.6722848415374756,
 1.6797456741333008,
 1.6871848106384277,
 1.6946487426757812,
 1.7022688388824463,
 1.7098469734191895,
 1.7173528671264648,
 1.724863052368164,
 1.73232102394104,
 1.7397880554199219,
 1.7472498416900635,
 1.7546827793121338,
 1.762143850326538,
 1.7696146965026855,
 1.777108907699585,
 1.7845828533172607,
 1.7920348644256592,
 1.7994859218597412,
 1.806952953338623,
 1.8144299983978271,
 1.8218896389007568,
 1.8293559551239014,
 1.8368110656738281,
 1.8442790508270264,
 1.851726770401001,
 1.8592119216918945,
 1.86667799949646,
 1.8741397857666016,
 1.8815827369689941,
 1.8890256881713867,
 1.8964788913726807,
 1.9039208889007568,
 1.911383867263794,
 1.918832778930664,
 1.9262988567352295,
 1.9337799549102783,
 1.94124174118042,
 1.948828935623169,
 1.9562938213348389,
 1.9637949466705322,
 1.9712047576904297,
 1.9786548614501953,
 1.986097812652588,
 1.9935338497161865,
 2.000976800918579,
 2.0084168910980225,
 2.016091823577881,
 2.023655891418457,
 2.031132936477661,
 2.038616895675659,
 2.0460739135742188,
 2.053546905517578,
 2.060973882675171,
 2.0684218406677246,
 2.0758438110351562,
 2.083289861679077,
 2.0906968116760254,
 2.0981409549713135,
 2.1055638790130615,
 2.1129748821258545,
 2.1203808784484863,
 2.1278228759765625,
 2.1352219581604004,
 2.1426548957824707,
 2.1502327919006348,
 2.1577627658843994,
 2.165205955505371,
 2.1726489067077637,
 2.180156946182251,
 2.1876187324523926,
 2.195056915283203,
 2.202542781829834,
 2.210002899169922,
 2.217458963394165,
 2.2249059677124023,
 2.232353925704956,
 2.2398228645324707,
 2.247271776199341,
 2.2547237873077393,
 2.262202739715576,
 2.269657850265503,
 2.277296781539917,
 2.284979820251465,
 2.2924628257751465,
 2.2999508380889893,
 2.3074228763580322,
 2.3148908615112305,
 2.3223717212677,
 2.329817771911621,
 2.3372578620910645,
 2.34472393989563,
 2.3521809577941895,
 2.359632968902588,
 2.367115020751953,
 2.374567985534668,
 2.382063865661621,
 2.38950777053833,
 2.3970019817352295,
 2.404465913772583,
 2.4119558334350586,
 2.4194018840789795,
 2.4268767833709717,
 2.4343249797821045,
 2.441788911819458,
 2.4492337703704834,
 2.45668888092041,
 2.4641637802124023,
 2.471620798110962,
 2.479109764099121,
 2.48657488822937,
 2.494025945663452,
 2.501471996307373,
 2.508949041366577,
 2.5164427757263184,
 2.523920774459839,
 2.531388998031616,
 2.53886079788208,
 2.5463309288024902,
 2.5537829399108887,
 2.5612847805023193,
 2.568727731704712,
 2.576223850250244,
 2.583711862564087,
 2.591172933578491,
 2.598625898361206,
 2.6060757637023926,
 2.6135129928588867,
 2.621011972427368,
 2.628448963165283,
 2.635972738265991,
 2.643435001373291,
 2.650902032852173,
 2.6583468914031982,
 2.665862798690796,
 2.673314094543457,
 2.680816888809204,
 2.688267946243286,
 2.6957550048828125,
 2.7032127380371094,
 2.7106738090515137,
 2.7181079387664795,
 2.725554943084717,
 2.732996940612793,
 2.740450859069824,
 2.747886896133423,
 2.7553389072418213,
 2.7627639770507812,
 2.7702107429504395,
 2.777662992477417,
 2.7851169109344482,
 2.7925288677215576,
 2.80000376701355,
 2.8074288368225098,
 2.8148789405822754,
 2.8223319053649902,
 2.8297858238220215,
 2.8372128009796143,
 2.84466290473938,
 2.852128028869629,
 2.85958194732666,
 2.8670127391815186,
 2.8744797706604004,
 2.8819189071655273,
 2.8893797397613525,
 2.896803855895996,
 2.9042470455169678,
 2.911679983139038,
 2.919153928756714,
 2.9266068935394287,
 2.9340579509735107,
 2.9415018558502197,
 2.9490177631378174,
 2.9564428329467773,
 2.9638688564300537,
 2.9712448120117188,
 2.9786460399627686,
 2.986050844192505,
 2.9934427738189697,
 3.0008530616760254,
 3.0082297325134277,
 3.015631914138794,
 3.023007869720459,
 3.030390977859497,
 3.0377516746520996,
 3.04512882232666,
 3.052503824234009,
 3.0598559379577637,
 3.067525863647461,
 3.074979782104492,
 3.082453966140747,
 3.089857816696167,
 3.0973098278045654,
 3.104733943939209,
 3.1121609210968018,
 3.11958384513855,
 3.1270148754119873,
 3.1344220638275146,
 3.141826868057251,
 3.1492297649383545,
 3.1566479206085205,
 3.1641108989715576,
 3.1720409393310547,
 3.18062686920166,
 3.188631772994995,
 3.19647479057312,
 3.2040579319000244,
 3.211491823196411,
 3.2189619541168213,
 3.2264137268066406,
 3.2338807582855225,
 3.241302013397217,
 3.248771905899048,
 3.256213903427124,
 3.263671875,
 3.2710888385772705,
 3.2785208225250244,
 3.285946846008301,
 3.293437957763672,
 3.3010239601135254,
 3.3086907863616943,
 3.3162219524383545,
 3.3237030506134033,
 3.3311376571655273,
 3.3386118412017822,
 3.3460726737976074,
 3.3535208702087402,
 3.3609509468078613,
 3.368414878845215,
 3.3758559226989746,
 3.3833189010620117,
 3.3907477855682373,
 3.3982179164886475,
 3.405695915222168,
 3.413137912750244,
 3.420606851577759,
 3.4280447959899902,
 3.435490846633911,
 3.4429378509521484,
 3.4504079818725586,
 3.4578518867492676,
 3.4652678966522217,
 3.4726951122283936,
 3.4801628589630127,
 3.4876327514648438,
 3.4950459003448486,
 3.502520799636841,
 3.5099668502807617,
 3.5174667835235596,
 3.5249149799346924,
 3.532382011413574,
 3.5398058891296387,
 3.547271966934204,
 3.554724931716919,
 3.5621488094329834,
 3.5695910453796387,
 3.5770299434661865,
 3.5844788551330566,
 3.5919089317321777,
 3.599360942840576,
 3.6068217754364014,
 3.6142799854278564,
 3.6217379570007324,
 3.6291840076446533,
 3.636641025543213,
 3.6440939903259277,
 3.651533842086792,
 3.658979892730713,
 3.6664540767669678,
 3.67389178276062,
 3.681334972381592,
 3.688839912414551,
 3.6963768005371094,
 3.7038447856903076,
 3.711305856704712,
 3.718761920928955,
 3.726195812225342,
 3.7336368560791016,
 3.741126775741577,
 3.7485568523406982,
 3.7559916973114014,
 3.763450860977173,
 3.770900011062622,
 3.778341770172119,
 3.785810947418213,
 3.7932307720184326,
 3.800668954849243,
 3.808100938796997,
 3.8155479431152344,
 3.82303786277771,
 3.8304550647735596,
 3.8379018306732178,
 3.845344066619873,
 3.852766990661621,
 3.860213041305542,
 3.867640733718872,
 3.8750839233398438,
 3.8825418949127197,
 3.8900070190429688,
 3.897446870803833,
 3.9049458503723145,
 3.9123809337615967,
 3.919834852218628,
 3.927325963973999,
 3.934762954711914,
 3.9422247409820557,
 3.9497127532958984,
 3.957167863845825,
 3.9645960330963135,
 3.972066879272461,
 3.9795138835906982,
 3.9869298934936523,
 3.9943947792053223,
 4.001836776733398,
 4.0092689990997314,
 4.016718864440918,
 4.0241899490356445,
 4.031642913818359,
 4.039106845855713,
 4.046592950820923,
 4.05404806137085,
 4.061479806900024,
 4.068920850753784,
 4.076357841491699,
 4.083805799484253,
 4.0912556648254395,
 4.098691701889038,
 4.106162786483765,
 4.1136109828948975,
 4.121060848236084,
 4.128498792648315,
 4.135960817337036,
 4.143415689468384,
 4.15084171295166,
 4.158272981643677,
 4.16582989692688,
 4.173282861709595,
 4.180737733840942,
 4.188170909881592,
 4.195602893829346,
 4.203077793121338,
 4.210502862930298,
 4.2179529666900635,
 4.225406885147095,
 4.232857704162598,
 4.240309000015259,
 4.247731924057007,
 4.255206823348999,
 4.262646913528442]

myList_fitnessValues = [1.177397872785327,
 1.1838368070851042,
 1.198426283830517,
 1.1971495165606483,
 1.1300637485336795,
 1.2187992912454821,
 1.2145353817939883,
 1.0729413153620015,
 1.2521284084941269,
 1.2183068116189408,
 1.195634989638366,
 1.1613388860470966,
 1.2217006054348303,
 1.206234560770683,
 1.2372446068751055,
 1.187058775523,
 1.1872546511295015,
 1.1966112517544802,
 1.2145107120984742,
 1.2421864845871378,
 1.1890153127520433,
 1.1674951340729436,
 1.2251505016710167,
 1.1958552931582382,
 1.2080607542394712,
 1.201035514597457,
 1.092659066061191,
 1.2306418318602446,
 1.1995437445068218,
 1.2449192292367206,
 1.2106208502011808,
 1.2112721352650087,
 1.1196669840676667,
 1.1134332262454683,
 1.1197768644022856,
 1.2261263457543805,
 1.231366828628176,
 1.2196350828703688,
 1.08741318320004,
 1.2032137535738274,
 1.2024228903569536,
 1.2137572975032105,
 1.0738592164216931,
 1.1738526733756591,
 1.1544974613440897,
 1.160844467172908,
 1.2187677280979918,
 1.162505454897613,
 1.2021549705530339,
 1.229063908531223,
 1.214924462090727,
 1.1411833735549284,
 1.1883797211741252,
 1.1342311436728563,
 1.2194421521815677,
 1.1237953059433416,
 1.185322478323287,
 1.1688528378709393,
 1.138039592406455,
 1.1855580350049484,
 1.2303222163698007,
 1.2140360262028758,
 1.09912727836326,
 1.0982013456663848,
 1.2074961979865895,
 1.2130674992213648,
 1.1064772919391566,
 1.2183787053226458,
 1.2387016873859218,
 1.1316362444070998,
 1.0955985789217237,
 1.2295510887027803,
 1.2321228706728062,
 1.2291667095487586,
 1.1943183790667353,
 1.1806877475400122,
 1.0821097661565597,
 1.1885871916833606,
 1.2287827776186633,
 1.1245075536475073,
 1.246567313324614,
 1.1968924804246073,
 1.2357189468661003,
 1.0798212767853532,
 1.210981845170037,
 1.1949578119730175,
 1.0745447494722138,
 1.1842984199966768,
 1.1885233082136473,
 1.1404877293427729,
 1.176750616683678,
 1.2322331744279031,
 1.2008328893267939,
 1.1839763301938666,
 1.1740540064695157,
 1.1215709455350205,
 1.1838699168837248,
 1.2190806980658488,
 1.2187178223617976,
 1.188198435991883,
 1.2420874742392598,
 1.1936975325903234,
 1.145645140863139,
 1.1896439998849606,
 1.0901724022621744,
 1.2214054198855253,
 1.202183913330283,
 1.2214232388980968,
 1.2451547757149166,
 1.1542504637802762,
 1.2150818383252948,
 1.1551718106916113,
 1.180265276583371,
 1.2259447669065064,
 1.23970172148869,
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]


How should I plot this large data using python to better visualize the data?

CodePudding user response:

A simple and common method to get a better overview about this kind of data is to calculate the Moving average for sample data

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