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Why am I getting multiple curves instead of one in a pdf

Time:11-01

I'm trying to plot a histogram and a pdf for a normal distribution function of data_2, but I'm getting multiple lines instead of one, like this

enter image description here

Here is my code

def normal_dist(data_list):
    density_func = sps.norm.pdf(data_list, np.mean(data_list), np.std(data_list))
    return density_func

def plot_histo(data_list, bin_count , pdf):
    plt.hist(data_list, bins=bin_count, density= True)
    plt.plot(data_list, pdf , color = 'red')
    return plt.show()

pdf = normal_dist(data_2)
plot_2 = plot_histo(data_2, 100, pdf)

And a sample of data_2:

[ 3.11841590e-02,  2.23345118e-01, -1.89204068e-02, -6.31564760e-02,
       -4.27022578e-01, -1.54170349e-01, -4.88208419e-01,  2.14631207e-02,
       -2.73419062e-01, -1.38106100e 00,  8.81113685e-01,  1.25987754e 00,
        1.04900977e 00,  6.99666121e-01, -1.05156527e 00,  6.20471652e-01,
        8.35693796e-01,  2.46004933e 00,  1.42874319e 00,  6.45896173e-01,
        1.74994078e 00,  2.96366552e-01, -6.74003046e-01,  4.21934844e-01,
        5.70015667e-02, -8.10215165e-01,  6.06754238e-01, -4.77303050e-01,
       -6.54126903e-01, -2.55836466e-01,  2.08806428e 00,  5.68842784e-01,
        3.79798676e-01,  1.06387784e 00, -9.65929365e-01, -1.43670616e 00,
       -1.21635393e-01, -1.65825213e 00,  9.11406485e-01,  8.73209057e-01,
        1.42189523e 00, -5.99055893e-02, -1.69854561e 00, -3.62268611e-01,
        2.68751640e-01, -2.62587089e-03, -4.05117356e-01, -2.07333014e 00,
        4.65130373e-01,  9.33525467e-02, -7.90668641e-01,  7.40646803e-02,
        5.88482026e-01,  1.29044613e-01, -8.37973930e-01, -2.33530013e-02,
        6.08157405e-01, -1.43976576e-01,  8.02086152e-01, -9.94734699e-01,
        1.51874119e 00, -1.14426450e 00,  6.71152207e-02, -1.11425412e-01,
       -6.82547767e-01,  1.31582929e 00, -8.09610985e-01,  7.43109956e-01,
       -1.79707388e 00,  4.74154292e-01,  4.16998383e-01, -1.65972837e 00,
        1.80961330e 00, -5.06107051e-01,  3.11468230e-01, -4.15140810e-01,
       -8.93536443e-01,  6.78611344e-01,  2.95049566e 00,  1.24171948e 00,
        1.21311763e 00, -2.19490804e 00, -1.75695067e-01, -3.06632622e 00,
        3.40625088e-01,  5.55741209e-01,  3.22243960e-01,  1.08600529e 00,
       -1.21650576e 00,  5.11075407e-01,  2.41429043e-01,  4.66290904e-01,
       -1.35053720e 00,  1.09163520e 00,  1.04202893e-01, -9.87586614e-01,
        6.47939406e-01, -2.38065193e-01,  1.80251401e-01,  1.85071464e 00,
        5.85535912e-01,  1.05516244e 00,  3.18089424e-01,  1.24400674e 00,
        1.09343586e 00, -5.81921590e-01, -2.15164807e 00, -1.24829244e 00,
       -1.91805015e-01,  1.27533585e-01,  1.47487127e 00,  8.90096996e-01,
        9.67364106e-02,  1.67644873e 00,  3.17761803e-01,  4.64268810e-03,
       -2.18467559e-01,  4.11733324e-01, -2.52359415e 00,  2.86446392e 00,
       -6.27108947e-02,  8.48368438e-01,  2.43801247e-01,  2.39612776e-01,
       -4.52175453e-01,  4.31307141e-02,  8.09597691e-01, -2.24283455e-02,
        1.76882058e 00,  1.21119696e 00,  1.08904202e 00,  1.08552338e 00,
       -1.58995219e 00,  3.37458068e-01, -3.55285373e-01,  1.88085807e 00,
       -9.23499565e-01, -9.49464638e-04,  1.13424901e 00,  2.31938585e 00,
        1.65838455e-01, -1.08516887e 00, -2.07666956e-01,  6.34692553e-02,
        4.06261232e-01, -1.33232995e 00,  1.25611617e-02,  1.20332775e 00,
       -1.56122791e-01,  7.84345344e-01,  6.53785096e-01,  7.89824164e-01,
       -7.06367175e-01,  4.73266339e-01,  2.05675005e 00, -1.01913958e 00,
       -1.10088383e 00,  3.15820364e-02,  9.08308659e-01, -1.82010264e 00,
        4.72018352e-01, -2.38061275e-01, -3.61003012e-01,  6.65675247e-01,
        1.07807067e 00,  4.49993109e-02, -8.24985641e-01,  3.90078294e-01,
       -8.51933202e-01, -3.23038989e-01,  1.29391130e 00, -1.01548293e 00]

I don't really know why I'm getting this type of pdf , any tips?

CodePudding user response:

matplotlib.pyplot.plot will plot the points in the order provided. The weird plot you get is because your "x-values" in data_2 are not sorted. To solve that, do the following

def plot_histo(data_list, bin_count , pdf):
    plt.hist(data_list, bins=bin_count, density= True)
    # Get the indices of the elements in the sorted array
    ids = data_list.argsort()
    # Plot the pairs, sorted by "x-values"
    plt.plot(data_list[ids], pdf[ids], color = 'red')
    return plt.show()

and make sure that the data_list you pass to the function is a np.array

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