I have a file of the like:
H 1 2 3 4
H 1 2 3 4
C 1 2 3 4
$END
$EFRAG
COORD=CART
FRAGNAME=H2ODFT
O 1 2 3 4
H 1 2 3 4
H 1 2 3 4
FRAGNAME=H2ODFT
O 1 2 3 4
H 1 2 3 4
H 1 2 3 4
I want to remove the column "1" from the lines only after the $EFRAG line. and add a label to the O H H as well. My expected output is:
H 1 2 3 4
H 1 2 3 4
C 1 2 3 4
$END
$EFRAG
COORD=CART
FRAGNAME=H2ODFT
Oa 2 3 4
Hb 2 3 4
Hc 2 3 4
FRAGNAME=H2ODFT
Oa 2 3 4
Hb 2 3 4
Hc 2 3 4
I'm new to coding in bash, and I'm not quite sure where to start.
I was thinking of piping a grep command to a sed command, but I'm not sure how that syntax would look. Am also trying to learn awk, but that syntax is even more confusing to me. Currently trying to read a book on it's capabilities.
Any thoughts or ideas would be greatly appreciated!
L
CodePudding user response:
Use the following awk
processing:
awk '$0~/\$EFRAG/ {
start = 1; # marker denoting the needed block
split("a b c", suf); # auxiliary array of suffixes
}
start {
if (/^FRAGNAME/) idx = 1; # encountering subblock
if (/^[OH]/) { # if starting with O or H char
$2 = "";
$1 = $1""suf[idx ];
}
}1' test.txt
H 1 2 3 4
H 1 2 3 4
C 1 2 3 4
$END
$EFRAG
COORD=CART
FRAGNAME=H2ODFT
Oa 2 3 4
Hb 2 3 4
Hc 2 3 4
FRAGNAME=H2ODFT
Oa 2 3 4
Hb 2 3 4
Hc 2 3 4