This is my data:
> ptm <- read.csv('ptm.csv')
> ptm
Method X1HSTB X1I6WA X1U19A X1YSAC X1YTBA X2CDSA X5O38A
1 Class weighted loss 0.37 0.83 0.44 0.49 0.76 0.64 0.68
2 OS 0.58 0.81 0.29 0.33 0.76 0.62 0.68
3 2 phase swapped OS 0.40 0.81 0.29 0.30 0.75 0.70 0.63
4 Thresholding 0.42 0.81 0.29 0.29 0.70 0.69 0.66
5 2 phase swapped US 0.43 0.80 0.27 0.29 0.71 0.66 0.54
6 US 0.35 0.77 0.27 0.53 0.70 0.26 0.69
7 Unbalanced 0.43 0.69 0.27 0.34 0.70 0.44 0.52
8 Control 0.75 0.87 0.80 0.61 0.82 0.84 0.83
This is a rough idea of the plot I'd like to make: [1]: https://i.stack.imgur.com/0KlX1.png
This is what I tried:
> ptm_plot <- ggplot(data=ptm, aes(x="1HSTB", "1I6WA", "1U19A", "1YSAC",
"1YTBA","2CDSA", "5O38A",
y=X1HSTB, X1I6WA, X1U19A, X1YSAC, X1YTBA, X2CDSA, X5O38A, colour=Method))
geom_point(stat="identity")
> ptm_plot
This was the result: [2]: https://i.stack.imgur.com/ZveLo.png
It's close to what I want but I can't seem to get all my columns in there. Any help would be appreciated!
CodePudding user response:
We may need to reshape to 'long' format
library(dplyr)
library(tidyr)
ptm %>%
pivot_longer(cols = -Method) %>%
ggplot(aes(x = name, y = value, fill = Method))
geom_point(stat = 'identity')