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Load h5mu data from python in R to create a seurat object?

Time:11-05

I'm trying to load .h5mu data into R, but I can't seem to find any options for this. I have found a way to do it with .h5ad (anndata) but not .h5mu - any ideas here?

I was also thinking about using the 'Convert' function in SeuratDisk for this, but it appears that SeuratDisk cannot be found anymore in the most recent R when trying to use 'install.packages(SeuratDisk)'.

I hope some of you can help!

Best, Lasse

CodePudding user response:

It appears you can get said functionality from MuDataMAE . So far as I can tell, this has nothing to do with the python language but rather a defined format for storing some data.

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