I am trying to determine the maximum distance between any two pairs of GPS points in a data frame containing 1000's of GPS points. I am not sure what I have done thus far is correct. How can I accomplish this? Thanks
structure(list(Id = structure(c(1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 1L), .Label = "A628", class = "factor"), DateTime = structure(c(1557401400,
1557403200, 1557405000, 1557406800, 1557408600, 1557410400, 1557417600,
1557419400, 1557421200, 1557423000), class = c("POSIXct", "POSIXt"
), tzone = "CST6CDT"), Longitude = c(-97.4468676, -97.4760327,
-97.4766244, -97.4768354, -97.4766027, -97.4762566, -97.4756206,
-97.4760795, -97.4757018, -97.4758084), Latitude = c(26.5649515,
26.5864111, 26.5874319, 26.5874866, 26.5874287, 26.5878552, 26.5881477,
26.588534, 26.5879895, 26.5876414)), row.names = c(NA, 10L), class = "data.frame")
library(sp)
library(adehabitatHR)
library(raster)
library(rgdal)
library(sf)
collars <- read.csv('C:\\Users\\kujld016\\Desktop\\All\\Projects\\Thermal_Deer\\all_data\\collars_clean.csv')
collars <- collars %>%
mutate_if(is.character, as.factor) %>%
mutate(DateTime=as.POSIXct(DateTime, format="%Y-%m-%d %H:%M:%S",tz='CST6CDT'))
for(j in 1:length(collars)) {
collarIDs <- unique(collars$Id)
for(i in 1:length(collarIDs)) {
collarID <- collarIDs[i]
collar <- filter(collars, Id == collarID)
#coerce to spatialpointsdataframe and reproject
dat.sp<-SpatialPointsDataFrame(coords=collar[c('Longitude', 'Latitude')],data=collar,
proj4string=CRS(" proj=longlat ellps=WGS84 datum=WGS84 no_defs"))
dat.proj <- spTransform(dat.sp, CRS(" proj=utm zone=14 ellps=GRS80 datum=NAD83 units=m no_defs"))
aref <- (max(spDists(dat.proj))) ###is this calculating the maximum distance between any 2 points in the data frame
CodePudding user response:
Easier with the sf
package, rather than sp
:
library(sf)
library(dplyr)
# the_data <- from posted sample data in question
# make data.frame an sf object with lat/lon projection
data_sf <- st_as_sf(the_data, coords = c("Longitude", "Latitude")) %>%
st_set_crs(4326)
# distance matrix for all the points
dist_mat <- st_distance(data_sf)
# where's the longest distance?
which(dist_mat == max(dist_mat), arr.ind = TRUE)
#> row col
#> [1,] 8 1
#> [2,] 1 8
dist_mat[8,1]
#> 3913.472 [m]
Created on 2022-04-08 by the reprex package (v2.0.1)
CodePudding user response:
Another option: find the minimum enclosing circle of your points (package {lwgeom}). This circle's diameter or bounding box edge length is the distance separating the two most extreme points of your sample.
library(sf)
library(dplyr)
library(lwgeom) ## for the bounding circle
## df = your dataframe with long/lat columns
my_points <- st_multipoint(cbind(df$Longitude, df$Latitude)) %>%
st_sfc %>%
## specify that these are unprojected geographic coordinates
## (longitude, latitude) of EPSG 4326 = WGS84
st_set_crs(4326) %>%
## now transform into appropriate projection for measuring
## distance, e.g. EPSG 32614 = UTM 14N for your location
st_transform(32614)
## get bounding circle:
my_bcircle <- my_points %>%
lwgeom::st_minimum_bounding_circle(.)
## get bounding box of bounding circle
## and its edge length = max_dist:
my_bbox <- my_bcircle %>% st_bbox
max_dist <- my_bbox %>% .[c('xmax','xmin')] %>% dist
quick visual check:
library(mapview)
mapview(my_bbox)
mapview(my_bcircle)
mapview(my_points)
maximum distance in metres:
# > max_dist
#
# xmax
# xmin 3910.623
#