I am new to R and I am trying to get some experience coding. I have quite a large program but I can't seem to figure out how to code the following. Any help would be greatly appreciated
X
: a data matrix with "r"-many columns and "n"-many rows (r x n)
x
: a vector with "r" many variables
l
: a vector with "r" many variables
z_j
: all the values of in the column "j" of the data matrix X
This is what I have so far, but it's not giving me the expected output
X<-matrix(c(0,1,2,1,2,4), ncol = 2)
x<-numeric()
x[1] <- 2
x[2] <- 5
l<-numeric()
l[1] <- 0.5
l[2] <- 0.5
for (j in 1:ncol(X)){
for (i in 1:nrow(X)){
mean(prod((l[j]^(abs(X[i,j]-x[j])))/sum(l[j]^(abs(X[i,j]-X[1:nrow(X),j])))))
}
}
CodePudding user response:
You're never aggregating up the product and sum; but your formula looks right enough.
If you follow your notation a bit more closely and break it up; I think it is easier to follow.
# Create toy data
n <- 10
r <- 5
X <- matrix(runif(r*n), n, r)
x <- runif(r)
l <- runif(r)
# Making the sum
summand <- 0
for (i in seq_len(n)) {
product <- 1
for (j in seq_len(r)) {
top <- l[j]^abs(X[i, j] - x[j])
bot <- sum(l[j]^abs(X[i, j] - X[, j]))
product <- product*top/bot
}
summand <- summand product/n
}
print(summand)
# [1] 4.709275e-05
This can probably be made much more efficient using proper vectorization. Anyway, on you data, I get:
print(summand)
#[1] 0.07704795