Is there a way to use curve_fit to fit for a function with multiple independent variables like below?
I try to get the value for a1, b1, c1, a2, b2, c2, a3, b3, c3 and d while x1, x2, x3 and y1 (dependent variable) are all known. I want to optimize these values to minimize my error by using scipy.optimize. Be noted in real situation, for x1, x2, x3 and y1, I have more than hundred data points.
Or if there is a better way or more appropriate way to get the value for a1, b1, c1, a2, b2, c2, a3, b3, c3 and d?
import numpy as np
from scipy.optimize import curve_fit
x1 = [3,2,1]
x2 = [3,4,2]
x3 = [1,2,4]
y1 = [5,7,9]
def func(x1, x2, a1, b1, c1, a2, b2, c2, d):
return (a1*x1**3 b1*x1**2 c1*x1) (a2*x2**3 b2*x2**2 c2*x2) d
def func2(x1, x2, x3, a1, b1, c1, a2, b2, c2, a3, b3, c3, d):
return (a1*x1**3 b1*x1**2 c1*x1) (a2*x2**3 b2*x2**2 c2*x2) (a3*x3**3 b3*x3**2 c3*x3) d
CodePudding user response:
You need to pass x1
and x2
in one object, see description of xdata
in docs for curve_fit
:
The independent variable where the data is measured. Should usually be an M-length sequence or an (k,M)-shaped array for functions with k predictors, but can actually be any object.
Example:
import numpy as np
from scipy.optimize import curve_fit
# generate sample data for a1, b1, c1, a2, b2, c2, d = 1, 2, 3, 4, 5, 6, 7
np.random.seed(0)
x1 = np.random.randint(0, 100, 100)
x2 = np.random.randint(0, 100, 100)
y1 = (1 * x1**3 2 * x1**2 3 * x1) (4 * x2**3 5 * x2**2 6 * (x2 np.random.randint(-1, 1, 100))) 7
def func(x, a1, b1, c1, a2, b2, c2, d):
return (a1 * x[0]**3 b1 * x[0]**2 c1 * x[0]) (a2 * x[1]**3 b2 * x[1]**2 c2 * x[1]) d
popt, _ = curve_fit(func, np.stack([x1, x2]), y1)
Result:
array([1.00000978, 1.99945039, 2.97065876, 4.00001038, 4.99920966,
5.97424668, 6.71464229])